Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929427.1_cds_XP_016476711.1_68513
CDS Infomation

[gene=LOC107798251] [db_xref=GeneID:107798251] [protein=uncharacterized WD repeat-containing protein C3H5.08c-like] [protein_id=XP_016476711.1] [location=complement(join(27807..28363,28473..28566,28651..28785,28887..29044,29180..29270,29345..30286))] [gbkey=CDS]
Sequence

ATGCAAGAAATGCAGAGTTTAAATGAAGTAGAAGAAGTTTTCTTTGATTCTGTTGAGTCA
CTGTTGTTAGAAGAACCTGCTTTTGTAGAAAAGAAGTCGGGGTATGATTTATGGTTGGAG
GAGCCAGAAAGTGTGAAGACACGACGAGAGAATTTTTTGCACGAAATGGGATTTGTTGAA
TTTGACTGCCTGCCTAGTGTAGTCTCTGATGAATCTGATTCAATGGGACTGAATAGGATT
ACAGAAAGCAGTGGTGCAGTCTGTAGTTCTGCTTCAGAGGAAGATTTTATGTGTAATGTA
AGGGAATCCAGTGGTAGTGCAAATTCGTCTGCCGATGAATTAGATCAGATTTGGTTTGAT
GATGTTGCTGAAGTTTCAAGTAGTGGTTGCACTGTTCATTCTCCTGATGGAGAACATACT
TGTTTTGATGCCACTTCCGACCCCACTCACGGTAAGGATAGCAAGTCGAAAAACCAGAAA
ATGAAGAAGTGGTGGAAACAATTTAGCCAAAAGATGAGGAAAAGTCAATCAACTGAGGTA
TCTAAGGTATTCACTGAAAAGCAGAAGGTAACTCCAATGGAAGTGCATCTGAACAGGAAA
AAAATTAAGGAGTTCAGTGCTGTTTACTGTGGACAAGAAATTAGTGCTCACAGTGGCCTA
ATTTGGACAATGAAGTTTAGTCCAGATGGGAAATATTTGGCAAGTGGTGGTGAAGATGGG
GTTGTTCGAATTTGGCTGGTCACTTTCGATTCATCATGTGAATCACCTGAGTTCAATTTC
AGCTGTCACCTCATCAAAGGGAAGCATGGACATAAAAAGAACAAGTCTTGTTACACCCCT
GTTATTGTTCCTGAGAAGGTATTCAAGATTGACGAGTCACCGCTGCATGAGTTTCATGGC
CATACTGCTGGCATATTGGACCTTGCTTGGTCCTCTTCTAACTGTCTTCTATCATCATCC
ATGGATGAAACTGTTCGTCTATGGGAAGTTGGTTCGGATGGATGTCATGGAGTTTTTCCC
CACAACAACTATGTGACATGCATCCAATTCAATCCTGTTAACGAGAACATCTTCATCAGT
GGCTCCATAGATGGAAAAGTTCGTATTTGGGGAGTTCCAGAAAAGCGAGTTGTGGAATGG
GCCGATGTGCATGACCTTGTGACTGCCGTAGCGTATCAACCAAATGGCAAGGGCTTTATA
GTTGGTTGTATCTCTGGTACTTGCCGCTTCTATGAAGTAAACGATGAAACTTTACTTTCC
CTCAACACACAAATACATCTTCATAGTAAGAAGAAATCCTCTGGCAGTAGAATTACAGGC
ATTCAGTTTTTCGAAAATGACTCTCAAAGAGTTATGATAACATCTGAGGATTCCAAAATC
CATAATCTTGATCGGGTCGAGGTTGTGCAAAAATATAAAGGTCTATCAAAATCAGGAAGC
CACACATCTGCCACATTTACCTCAACCGGGAAACACATAGTATCAGTTGGAGAGGACTCG
CACGTATATCTTTGGGACTATAATGACATAAGCATCCAAGCGTCCAAACAAACAAAATCT
ATACGGTCGTGTGAGCATTTCCACTCCAAAGGCGTTTCTGTTGCAATACCATGGGCAGGA
CAGGCAACAACAGCAGATGATTCAGAAAATTTTGGCAGTTCTAACGTTGATCCACTAATA
GGTGAACCTCAAGAGGATTTTTCTAAGACAAGGGATTCAAGCCGATTTTCCATAGGAAAT
TGGTTTACTATGGATGTATCATCTAGGGGTTCTGTAACATGGCCAGAGGAAATGCTTCTA
CCCAGTGCTGAAAATTATGAACACCATTCTACTTATCACGATGATCCTCTTTATCAGCAT
AACAAAAATGTTAACTACAGAGCATTATCTCCGGCATGGGGCCTTGTCGTTGTGACAGCT
GGTTGGGATGGAAAGATTCGGACATTCCACAACTATGGATTGCCGGTAAGAGTTTAA

Peptide Sequence

PEP ID

XP_016476711.1
PEP Infomation

PREDICTED: uncharacterized WD repeat-containing protein C3H5.08c-like [Nicotiana tabacum]
Sequence

MQEMQSLNEVEEVFFDSVESLLLEEPAFVEKKSGYDLWLEEPESVKTRRENFLHEMGFVE
FDCLPSVVSDESDSMGLNRITESSGAVCSSASEEDFMCNVRESSGSANSSADELDQIWFD
DVAEVSSSGCTVHSPDGEHTCFDATSDPTHGKDSKSKNQKMKKWWKQFSQKMRKSQSTEV
SKVFTEKQKVTPMEVHLNRKKIKEFSAVYCGQEISAHSGLIWTMKFSPDGKYLASGGEDG
VVRIWLVTFDSSCESPEFNFSCHLIKGKHGHKKNKSCYTPVIVPEKVFKIDESPLHEFHG
HTAGILDLAWSSSNCLLSSSMDETVRLWEVGSDGCHGVFPHNNYVTCIQFNPVNENIFIS
GSIDGKVRIWGVPEKRVVEWADVHDLVTAVAYQPNGKGFIVGCISGTCRFYEVNDETLLS
LNTQIHLHSKKKSSGSRITGIQFFENDSQRVMITSEDSKIHNLDRVEVVQKYKGLSKSGS
HTSATFTSTGKHIVSVGEDSHVYLWDYNDISIQASKQTKSIRSCEHFHSKGVSVAIPWAG
QATTADDSENFGSSNVDPLIGEPQEDFSKTRDSSRFSIGNWFTMDVSSRGSVTWPEEMLL
PSAENYEHHSTYHDDPLYQHNKNVNYRALSPAWGLVVVTAGWDGKIRTFHNYGLPVRV

Transcript Sequence

Gene sequence data has not been registered.